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Phys. Rev. E 78, 046102 (2008) [7 pages]

Network quotients: Structural skeletons of complex systems

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Yanghua Xiao1, Ben D. MacArthur2, Hui Wang3, Momiao Xiong4,5, and Wei Wang1
1Department of Computing and Information Technology, Fudan University, Shanghai 200433, People’s Republic of China
2School of Mathematics, University of Southampton, Southampton, SO17 1BJ, United Kingdom
3Business School, University of Shanghai for Science and Technology, Shanghai 200093, People’s Republic of China
4Theoretical Systems Biology Lab, School of Life Science, Fudan University, Shanghai 200433, People’s Republic of China
5Human Genetics Center, University of Texas Health Science Center at Houston, Houston Texas 77225, USA

Received 17 March 2008; published 3 October 2008

A defining feature of many large empirical networks is their intrinsic complexity. However, many networks also contain a large degree of structural repetition. An immediate question then arises: can we characterize essential network complexity while excluding structural redundancy? In this article we utilize inherent network symmetry to collapse all redundant information from a network, resulting in a coarse graining which we show to carry the essential structural information of the “parent” network. In the context of algebraic combinatorics, this coarse-graining is known as the “quotient.” We systematically explore the theoretical properties of network quotients and summarize key statistics of a variety of “real-world” quotients with respect to those of their parent networks. In particular, we find that quotients can be substantially smaller than their parent networks yet typically preserve various key functional properties such as complexity (heterogeneity and hub vertices) and communication (diameter and mean geodesic distance), suggesting that quotients constitute the essential structural skeletons of their parent networks. We summarize with a discussion of potential uses of quotients in analysis of biological regulatory networks and ways in which using quotients can reduce the computational complexity of network algorithms.

© 2008 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevE.78.046102
DOI:
10.1103/PhysRevE.78.046102
PACS:
89.75.Fb, 05.40.−a, 02.20.−a