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Phys. Rev. E 76, 011923 (2007) [6 pages]

Nonlinear drift-diffusion model of gating in the fast Cl channel

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S. R. Vaccaro*
Department of Physics, University of Adelaide, Adelaide, South Australia, 5005, Australia

Received 1 February 2007; published 30 July 2007

The dynamics of the open or closed state region of an ion channel may be described by a probability density p(x,t) which satisfies a Fokker-Planck equation. The closed state dwell-time distribution fc(t) derived from the Fokker-Planck equation with a nonlinear diffusion coefficient D(x)∝exp(−γx), γ>0 and a linear ramp potential Uc(x), is in good agreement with experimental data and it may be shown analytically that if γ is sufficiently large, fc(t)∝t−2−ν for intermediate times, where ν=Ucγ≈−0.3 for a fast Cl channel. The solution of a master equation which approximates the Fokker-Planck equation exhibits an oscillation superimposed on the power law trend and can account for an empirical rate-amplitude correlation that applies to several ion channels.

© 2007 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevE.76.011923
DOI:
10.1103/PhysRevE.76.011923
PACS:
87.15.He, 05.10.Gg, 05.40.Jc, 87.16.Uv

*svaccaro@physics.adelaide.edu.au