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Phys. Rev. E 75, 026307 (2007) [11 pages]

Fluctuating hydrodynamic modeling of fluids at the nanoscale

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G. De Fabritiis1,*, M. Serrano2,†, R. Delgado-Buscalioni3,‡, and P. V. Coveney4,§
1Computational Biochemistry and Biophysics Laboratory (GRIB/IMIM-UPF), Barcelona Biomedical Research Park (PRBB), C/ Dr. Aiguader 88, 08003, Barcelona, Spain
2Departamento de Física Fundamental, Facultad de Ciencias, UNED, Paseo Senda del Rey 9, 28040 Madrid, Spain
3Departamento de Física Teórica de la Materia Condensada, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain
4Centre for Computational Science, Department of Chemistry, University College London, 20 Gordon Street, WC1H 0AJ London, United Kingdom

Received 17 October 2006; published 8 February 2007

A good representation of mesoscopic fluids is required to combine with molecular simulations at larger length and time scales [ De Fabritiis et al. Phys. Rev. Lett. 97 134501 (2006)]. However, accurate computational models of the hydrodynamics of nanoscale molecular assemblies are lacking, at least in part because of the stochastic character of the underlying fluctuating hydrodynamic equations. Here we derive a finite volume discretization of the compressible isothermal fluctuating hydrodynamic equations over a regular grid in the Eulerian reference system. We apply it to fluids such as argon at arbitrary densities and water under ambient conditions. To that end, molecular dynamics simulations are used to derive the required fluid properties. The equilibrium state of the model is shown to be thermodynamically consistent and correctly reproduces linear hydrodynamics including relaxation of sound and shear modes. We also consider nonequilibrium states involving diffusion and convection in cavities with no-slip boundary conditions.

© 2007 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevE.75.026307
DOI:
10.1103/PhysRevE.75.026307
PACS:
47.61.−k, 47.11.Mn

*Electronic address: gdefabritiis@imim.es

Electronic address: mserrano@fisfun.uned.es

Electronic address: rafael.delgado@uam.es

§Electronic address: p.v.coveney@ucl.ac.uk