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Phys. Rev. E 63, 021503 (2001) [5 pages]

Effect of nonzero chain diameter on “DNA” condensation

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B.-Y. Ha1 and Andrea J. Liu2
1Department of Physics, Simon Fraser University, Burnaby, British Columbia V5 156, Canada
2Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095

Received 22 November 1999; published 22 January 2001

We present a simple model to investigate the effect of chain diameter on multivalent-counterion-induced attractions between two charged chains. In our minimal model, the chains are rigid rods of diameter D with a uniform charge density on the surface, and the counterions are point ions. As a function of the separation between two rods, we find a repulsive barrier in the free energy whose height increases with D. We have also explored the effect of counterion valency Z on the interaction. For parameters characteristic of DNA, we find that a minimum valency of Z=3 is required to produce condensation. We also find that the shape of the potential is fairly insensitive to Z for Z>~3. These results are consistent with experimental observations of DNA condensation.

© 2001 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevE.63.021503
DOI:
10.1103/PhysRevE.63.021503
PACS:
61.25.Hq, 61.20.Qg, 87.15.Nn