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Phys. Rev. E 60, 3219–3226 (1999)

Energy landscapes, supergraphs, and “folding funnels” in spin systems

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Piotr Garstecki1, Trinh Xuan Hoang2, and Marek Cieplak2
1Institute of Chemical Physics, Polish Academy of Sciences, ul. Kasprzaka 44/52, 01-224 Warsaw, Poland
2Institute of Physics, Polish Academy of Sciences, Al. Lotnikow 32/46, 02-668 Warsaw, Poland

Received 30 March 1999; published in the issue dated September 1999

Dynamical connectivity graphs, which describe dynamical transition rates between local energy minima of a system, can be displayed against the background of a disconnectivity graph which represents the energy landscape of the system. The resulting supergraph describes both dynamics and statics of the system in a unified coarse-grained sense. We give examples of the supergraphs for several two-dimensional spin and protein-related systems. We demonstrate that disordered ferromagnets have supergraphs akin to those of model proteins whereas spin glasses behave like random sequences of amino acids that fold badly.

© 1999 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevE.60.3219
DOI:
10.1103/PhysRevE.60.3219
PACS:
87.15.By, 75.10.Nr