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Phys. Rev. E 59, 6001–6009 (1999)

Large-scale optimization of neuron arbors

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Christopher Cherniak*, Mark Changizi, and Du Won Kang
Committee on History and Philosophy of Science, Department of Philosophy, University of Maryland, College Park, Maryland 20742

Received 21 July 1998; published in the issue dated May 1999

At the global as well as local scales, some of the geometry of types of neuron arbors—both dendrites and axons—appears to be self-organizing: Their morphogenesis behaves like flowing water, that is, fluid dynamically; waterflow in branching networks in turn acts like a tree composed of cords under tension, that is, vector mechanically. Branch diameters and angles and junction sites conform significantly to this model. The result is that such neuron tree samples globally minimize their total volume—rather than, for example, surface area or branch length. In addition, the arbors perform well at generating the cheapest topology interconnecting their terminals: their large-scale layouts are among the best of all such possible connecting patterns, approaching 5% of optimum. This model also applies comparably to arterial and river networks.

© 1999 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevE.59.6001
DOI:
10.1103/PhysRevE.59.6001
PACS:
87.19.-j, 87.10.+e

*Electronic address: CHERNIAK@umail.umd.edu

Electronic address: CHANGIZI@cs.ucc.ie

Electronic address: DUWON@lexsolutions.com